Number of MITEs found in bacteria, archaea and viral sequences. Data on their sizes and clustering analysis (cut-off: 95% ID, 100% COV) are also indicated
. | . | Archaea . | Bacteria . | Virus GB . | Virus JIMG/VR . |
---|---|---|---|---|---|
# genomes/sequences analyzed | 8220 | 175 012 | 10 468 678 | 2 377 994 | |
# genomes/sequences with MITEs | 1015 | 102 498 | 361 | 310 | |
# genomes/sequences with si-vMITEs | – | – | 249 | 1591 | |
MITEs features | # MITEs | 18 091 | 1 406 057 | 610 | 1116 |
# unique MITEs | 7114 | 111 244 | 230 | 495 | |
# si-vMITEs | – | – | 613 | 4622 | |
MITE minimum size (bp) | 41 | 49 | 53 | 36 | |
MITE median size (bp) | 104 | 104 | 72 | 82 | |
MITE maximum size (bp) | 797 | 800 | 775 | 789 | |
#MITEs/genome (median) | 7 | 8 | 3 | 3 | |
# MITES/Kb | 0.008 | 0.004 | 0.04 | 0.11 |
. | . | Archaea . | Bacteria . | Virus GB . | Virus JIMG/VR . |
---|---|---|---|---|---|
# genomes/sequences analyzed | 8220 | 175 012 | 10 468 678 | 2 377 994 | |
# genomes/sequences with MITEs | 1015 | 102 498 | 361 | 310 | |
# genomes/sequences with si-vMITEs | – | – | 249 | 1591 | |
MITEs features | # MITEs | 18 091 | 1 406 057 | 610 | 1116 |
# unique MITEs | 7114 | 111 244 | 230 | 495 | |
# si-vMITEs | – | – | 613 | 4622 | |
MITE minimum size (bp) | 41 | 49 | 53 | 36 | |
MITE median size (bp) | 104 | 104 | 72 | 82 | |
MITE maximum size (bp) | 797 | 800 | 775 | 789 | |
#MITEs/genome (median) | 7 | 8 | 3 | 3 | |
# MITES/Kb | 0.008 | 0.004 | 0.04 | 0.11 |
Number of MITEs found in bacteria, archaea and viral sequences. Data on their sizes and clustering analysis (cut-off: 95% ID, 100% COV) are also indicated
. | . | Archaea . | Bacteria . | Virus GB . | Virus JIMG/VR . |
---|---|---|---|---|---|
# genomes/sequences analyzed | 8220 | 175 012 | 10 468 678 | 2 377 994 | |
# genomes/sequences with MITEs | 1015 | 102 498 | 361 | 310 | |
# genomes/sequences with si-vMITEs | – | – | 249 | 1591 | |
MITEs features | # MITEs | 18 091 | 1 406 057 | 610 | 1116 |
# unique MITEs | 7114 | 111 244 | 230 | 495 | |
# si-vMITEs | – | – | 613 | 4622 | |
MITE minimum size (bp) | 41 | 49 | 53 | 36 | |
MITE median size (bp) | 104 | 104 | 72 | 82 | |
MITE maximum size (bp) | 797 | 800 | 775 | 789 | |
#MITEs/genome (median) | 7 | 8 | 3 | 3 | |
# MITES/Kb | 0.008 | 0.004 | 0.04 | 0.11 |
. | . | Archaea . | Bacteria . | Virus GB . | Virus JIMG/VR . |
---|---|---|---|---|---|
# genomes/sequences analyzed | 8220 | 175 012 | 10 468 678 | 2 377 994 | |
# genomes/sequences with MITEs | 1015 | 102 498 | 361 | 310 | |
# genomes/sequences with si-vMITEs | – | – | 249 | 1591 | |
MITEs features | # MITEs | 18 091 | 1 406 057 | 610 | 1116 |
# unique MITEs | 7114 | 111 244 | 230 | 495 | |
# si-vMITEs | – | – | 613 | 4622 | |
MITE minimum size (bp) | 41 | 49 | 53 | 36 | |
MITE median size (bp) | 104 | 104 | 72 | 82 | |
MITE maximum size (bp) | 797 | 800 | 775 | 789 | |
#MITEs/genome (median) | 7 | 8 | 3 | 3 | |
# MITES/Kb | 0.008 | 0.004 | 0.04 | 0.11 |
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