Performance comparison of DeepRNA-Twist and SPOT-RNA-1D according to MAE in degrees based on various pairing interactions on SPOT-RNA-1D test set—TS3. Values of SPOT-RNA-1D are reported from [9]
| Angles . | Model . | Unpaired . | Lone pairs . | Pseudoknots . | Multiplets . | Noncanonical pairs . | Canonical nested pairs . |
|---|---|---|---|---|---|---|---|
| |$\boldsymbol{\alpha }$| | DeepRNA-Twist | 64.82 | 48.32 | 49.06 | 43.16 | 49.68 | 22.44 |
| SPOT-RNA-1D | 68.82 | 51.32 | 52.06 | 46.16 | 52.68 | 25.44 | |
| |$\boldsymbol{\beta }$| | DeepRNA-Twist | 31.74 | 29.53 | 29.42 | 27.95 | 26.72 | 13.40 |
| SPOT-RNA-1D | 33.74 | 31.53 | 31.42 | 29.95 | 28.72 | 15.40 | |
| |$\boldsymbol{\gamma }$| | DeepRNA-Twist | 54.96 | 47.84 | 30.42 | 43.50 | 41.05 | 22.61 |
| SPOT-RNA-1D | 58.96 | 50.84 | 32.42 | 46.50 | 44.05 | 24.61 | |
| |$\boldsymbol{\delta }$| | DeepRNA-Twist | 24.39 | 15.84 | 16.67 | 13.22 | 13.20 | 8.75 |
| SPOT-RNA-1D | 27.39 | 17.84 | 18.67 | 16.22 | 15.20 | 10.75 | |
| |$\boldsymbol{\epsilon }$| | DeepRNA-Twist | 30.83 | 25.01 | 19.40 | 22.73 | 21.94 | 17.68 |
| SPOT-RNA-1D | 32.83 | 27.01 | 21.40 | 24.73 | 22.94 | 18.68 | |
| |$\boldsymbol{\zeta }$| | DeepRNA-Twist | 58.55 | 37.07 | 27.20 | 33.15 | 33.95 | 14.99 |
| SPOT-RNA-1D | 61.55 | 40.07 | 29.20 | 35.15 | 34.95 | 15.99 | |
| |$\boldsymbol{\chi }$| | DeepRNA-Twist | 25.66 | 21.59 | 13.42 | 18.40 | 19.01 | 11.77 |
| SPOT-RNA-1D | 27.66 | 23.59 | 15.42 | 20.40 | 21.01 | 12.77 | |
| |$\boldsymbol{\eta }$| | DeepRNA-Twist | 51.43 | 28.11 | 30.02 | 26.60 | 25.14 | 14.01 |
| SPOT-RNA-1D | 54.43 | 30.11 | 32.02 | 28.60 | 27.14 | 16.01 | |
| |$\boldsymbol{\theta }$| | DeepRNA-Twist | 55.84 | 34.86 | 29.55 | 27.70 | 25.10 | 15.21 |
| SPOT-RNA-1D | 58.84 | 36.86 | 31.55 | 29.70 | 27.10 | 16.21 |
| Angles . | Model . | Unpaired . | Lone pairs . | Pseudoknots . | Multiplets . | Noncanonical pairs . | Canonical nested pairs . |
|---|---|---|---|---|---|---|---|
| |$\boldsymbol{\alpha }$| | DeepRNA-Twist | 64.82 | 48.32 | 49.06 | 43.16 | 49.68 | 22.44 |
| SPOT-RNA-1D | 68.82 | 51.32 | 52.06 | 46.16 | 52.68 | 25.44 | |
| |$\boldsymbol{\beta }$| | DeepRNA-Twist | 31.74 | 29.53 | 29.42 | 27.95 | 26.72 | 13.40 |
| SPOT-RNA-1D | 33.74 | 31.53 | 31.42 | 29.95 | 28.72 | 15.40 | |
| |$\boldsymbol{\gamma }$| | DeepRNA-Twist | 54.96 | 47.84 | 30.42 | 43.50 | 41.05 | 22.61 |
| SPOT-RNA-1D | 58.96 | 50.84 | 32.42 | 46.50 | 44.05 | 24.61 | |
| |$\boldsymbol{\delta }$| | DeepRNA-Twist | 24.39 | 15.84 | 16.67 | 13.22 | 13.20 | 8.75 |
| SPOT-RNA-1D | 27.39 | 17.84 | 18.67 | 16.22 | 15.20 | 10.75 | |
| |$\boldsymbol{\epsilon }$| | DeepRNA-Twist | 30.83 | 25.01 | 19.40 | 22.73 | 21.94 | 17.68 |
| SPOT-RNA-1D | 32.83 | 27.01 | 21.40 | 24.73 | 22.94 | 18.68 | |
| |$\boldsymbol{\zeta }$| | DeepRNA-Twist | 58.55 | 37.07 | 27.20 | 33.15 | 33.95 | 14.99 |
| SPOT-RNA-1D | 61.55 | 40.07 | 29.20 | 35.15 | 34.95 | 15.99 | |
| |$\boldsymbol{\chi }$| | DeepRNA-Twist | 25.66 | 21.59 | 13.42 | 18.40 | 19.01 | 11.77 |
| SPOT-RNA-1D | 27.66 | 23.59 | 15.42 | 20.40 | 21.01 | 12.77 | |
| |$\boldsymbol{\eta }$| | DeepRNA-Twist | 51.43 | 28.11 | 30.02 | 26.60 | 25.14 | 14.01 |
| SPOT-RNA-1D | 54.43 | 30.11 | 32.02 | 28.60 | 27.14 | 16.01 | |
| |$\boldsymbol{\theta }$| | DeepRNA-Twist | 55.84 | 34.86 | 29.55 | 27.70 | 25.10 | 15.21 |
| SPOT-RNA-1D | 58.84 | 36.86 | 31.55 | 29.70 | 27.10 | 16.21 |
Performance comparison of DeepRNA-Twist and SPOT-RNA-1D according to MAE in degrees based on various pairing interactions on SPOT-RNA-1D test set—TS3. Values of SPOT-RNA-1D are reported from [9]
| Angles . | Model . | Unpaired . | Lone pairs . | Pseudoknots . | Multiplets . | Noncanonical pairs . | Canonical nested pairs . |
|---|---|---|---|---|---|---|---|
| |$\boldsymbol{\alpha }$| | DeepRNA-Twist | 64.82 | 48.32 | 49.06 | 43.16 | 49.68 | 22.44 |
| SPOT-RNA-1D | 68.82 | 51.32 | 52.06 | 46.16 | 52.68 | 25.44 | |
| |$\boldsymbol{\beta }$| | DeepRNA-Twist | 31.74 | 29.53 | 29.42 | 27.95 | 26.72 | 13.40 |
| SPOT-RNA-1D | 33.74 | 31.53 | 31.42 | 29.95 | 28.72 | 15.40 | |
| |$\boldsymbol{\gamma }$| | DeepRNA-Twist | 54.96 | 47.84 | 30.42 | 43.50 | 41.05 | 22.61 |
| SPOT-RNA-1D | 58.96 | 50.84 | 32.42 | 46.50 | 44.05 | 24.61 | |
| |$\boldsymbol{\delta }$| | DeepRNA-Twist | 24.39 | 15.84 | 16.67 | 13.22 | 13.20 | 8.75 |
| SPOT-RNA-1D | 27.39 | 17.84 | 18.67 | 16.22 | 15.20 | 10.75 | |
| |$\boldsymbol{\epsilon }$| | DeepRNA-Twist | 30.83 | 25.01 | 19.40 | 22.73 | 21.94 | 17.68 |
| SPOT-RNA-1D | 32.83 | 27.01 | 21.40 | 24.73 | 22.94 | 18.68 | |
| |$\boldsymbol{\zeta }$| | DeepRNA-Twist | 58.55 | 37.07 | 27.20 | 33.15 | 33.95 | 14.99 |
| SPOT-RNA-1D | 61.55 | 40.07 | 29.20 | 35.15 | 34.95 | 15.99 | |
| |$\boldsymbol{\chi }$| | DeepRNA-Twist | 25.66 | 21.59 | 13.42 | 18.40 | 19.01 | 11.77 |
| SPOT-RNA-1D | 27.66 | 23.59 | 15.42 | 20.40 | 21.01 | 12.77 | |
| |$\boldsymbol{\eta }$| | DeepRNA-Twist | 51.43 | 28.11 | 30.02 | 26.60 | 25.14 | 14.01 |
| SPOT-RNA-1D | 54.43 | 30.11 | 32.02 | 28.60 | 27.14 | 16.01 | |
| |$\boldsymbol{\theta }$| | DeepRNA-Twist | 55.84 | 34.86 | 29.55 | 27.70 | 25.10 | 15.21 |
| SPOT-RNA-1D | 58.84 | 36.86 | 31.55 | 29.70 | 27.10 | 16.21 |
| Angles . | Model . | Unpaired . | Lone pairs . | Pseudoknots . | Multiplets . | Noncanonical pairs . | Canonical nested pairs . |
|---|---|---|---|---|---|---|---|
| |$\boldsymbol{\alpha }$| | DeepRNA-Twist | 64.82 | 48.32 | 49.06 | 43.16 | 49.68 | 22.44 |
| SPOT-RNA-1D | 68.82 | 51.32 | 52.06 | 46.16 | 52.68 | 25.44 | |
| |$\boldsymbol{\beta }$| | DeepRNA-Twist | 31.74 | 29.53 | 29.42 | 27.95 | 26.72 | 13.40 |
| SPOT-RNA-1D | 33.74 | 31.53 | 31.42 | 29.95 | 28.72 | 15.40 | |
| |$\boldsymbol{\gamma }$| | DeepRNA-Twist | 54.96 | 47.84 | 30.42 | 43.50 | 41.05 | 22.61 |
| SPOT-RNA-1D | 58.96 | 50.84 | 32.42 | 46.50 | 44.05 | 24.61 | |
| |$\boldsymbol{\delta }$| | DeepRNA-Twist | 24.39 | 15.84 | 16.67 | 13.22 | 13.20 | 8.75 |
| SPOT-RNA-1D | 27.39 | 17.84 | 18.67 | 16.22 | 15.20 | 10.75 | |
| |$\boldsymbol{\epsilon }$| | DeepRNA-Twist | 30.83 | 25.01 | 19.40 | 22.73 | 21.94 | 17.68 |
| SPOT-RNA-1D | 32.83 | 27.01 | 21.40 | 24.73 | 22.94 | 18.68 | |
| |$\boldsymbol{\zeta }$| | DeepRNA-Twist | 58.55 | 37.07 | 27.20 | 33.15 | 33.95 | 14.99 |
| SPOT-RNA-1D | 61.55 | 40.07 | 29.20 | 35.15 | 34.95 | 15.99 | |
| |$\boldsymbol{\chi }$| | DeepRNA-Twist | 25.66 | 21.59 | 13.42 | 18.40 | 19.01 | 11.77 |
| SPOT-RNA-1D | 27.66 | 23.59 | 15.42 | 20.40 | 21.01 | 12.77 | |
| |$\boldsymbol{\eta }$| | DeepRNA-Twist | 51.43 | 28.11 | 30.02 | 26.60 | 25.14 | 14.01 |
| SPOT-RNA-1D | 54.43 | 30.11 | 32.02 | 28.60 | 27.14 | 16.01 | |
| |$\boldsymbol{\theta }$| | DeepRNA-Twist | 55.84 | 34.86 | 29.55 | 27.70 | 25.10 | 15.21 |
| SPOT-RNA-1D | 58.84 | 36.86 | 31.55 | 29.70 | 27.10 | 16.21 |
This PDF is available to Subscribers Only
View Article Abstract & Purchase OptionsFor full access to this pdf, sign in to an existing account, or purchase an annual subscription.
